BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C12SP1|AL426193
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1538 0.0
>3x_Contig1713
Length = 18539
Score = 1538 bits (776), Expect = 0.0
Identities = 779/780 (99%)
Strand = Plus / Plus
Query: 1 gatcctgcgagaatttcattaggagcaattcaaactcgtttttttcgagcttcttgattc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7159 gatcctgcgagaattccattaggagcaattcaaactcgtttttttcgagcttcttgattc 7218
Query: 61 catcctcagggaaaactttcttcaagtttggacttttcactaacaactctaccatctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7219 catcctcagggaaaactttcttcaagtttggacttttcactaacaactctaccatctgtt 7278
Query: 121 taactctcccctcgggataccagcctcttaactcagggacataacattcaccttcataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7279 taactctcccctcgggataccagcctcttaactcagggacataacattcaccttcataac 7338
Query: 181 attggtaaccgttttcaattgggaccttatactctgcatttaaatccttgaggaccaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7339 attggtaaccgttttcaattgggaccttatactctgcatttaaatccttgaggaccaagt 7398
Query: 241 ttggtacatatgctggaacaccatggaaaaaagttaaccttagtggagatagttcgaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7399 ttggtacatatgctggaacaccatggaaaaaagttaaccttagtggagatagttcgaata 7458
Query: 301 gagtttggaaatgcttatttctacaattgtaagcttgagcatgtttattaatgttgtacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7459 gagtttggaaatgcttatttctacaattgtaagcttgagcatgtttattaatgttgtacc 7518
Query: 361 tatcctttaacgaatctgattgataaagttctttcttatctctttctttgatgtttcgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7519 tatcctttaacgaatctgattgataaagttctttcttatctctttctttgatgtttcgag 7578
Query: 421 acaaatactcatgccttgctcttgtcaattgtccttcggtcttatttaatgccaattcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7579 acaaatactcatgccttgctcttgtcaattgtccttcggtcttatttaatgccaattcat 7638
Query: 481 acttcaatctatccagaacgctgagccctgagacgttaggaacaacgttagggtcctcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7639 acttcaatctatccagaacgctgagccctgagacgttaggaacaacgttagggtcctcgt 7698
Query: 541 agaatggcatatgttctgggtcagttttcaaatcattaaaatatttgtggactaaccatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7699 agaatggcatatgttctgggtcagttttcaaatcattaaaatatttgtggactaaccatt 7758
Query: 601 cgaatctatcggcaattggttcataagatacagaaagaccggtgatatcaacgtacaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7759 cgaatctatcggcaattggttcataagatacagaaagaccggtgatatcaacgtacaaac 7818
Query: 661 cagaatcaacgtcaatgaatctggcgtcaatgttattcaaaccgttccccttgttcctag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7819 cagaatcaacgtcaatgaatctggcgtcaatgttattcaaaccgttccccttgttcctag 7878
Query: 721 cagtgatgaaggtacccacgtcgaggaaatatctaccgtttcctctagtaggatcctcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7879 cagtgatgaaggtacccacgtcgaggaaatatctaccgtttcctctagtaggatcctcaa 7938
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5928
Number of Sequences: 1807
Number of extensions: 5928
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)